Insertion junction: CLIP2.012504_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012504
Chromosome:chromosome 5
Location:1106965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248100 ANK1 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGGAAAGCATAGCCAGGAACAGTGGGGGTGGGAGAGGAGGAGGAGGA
Internal bar code:TTGTCTGTCTCGGCTATCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3459
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGAGTTTCACGACAACAC
Suggested primer 2:CACCACCCCCATACAACCTC