Insertion junction: CLIP2.012508_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012508
Chromosome:chromosome 3
Location:3149983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164850 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGACCCCCATGCTCCTCGCCTTCGGAGAGGGGAGGAACCCCAGGCCCG
Internal bar code:GGACCGTAGGATCAGTGATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2448
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACATCACGTGGAACCAG
Suggested primer 2:TCCATCCTACCCTCCACCTG