Insertion junction: CLIP2.012516_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012516
Chromosome:chromosome 12
Location:3508017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496900 (1 of 1) IPR002711//IPR003615//IPR004919 - HNH endonuclease // HNH nuclease // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATGCGACCTCTCCCCCCCCCACACACAGACACACAGACGCACGCACC
Internal bar code:AGAGCCTGTCTAGGGAAGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTACATCCGCATGCTG
Suggested primer 2:CATCCATACCCGGACAGCTC