Insertion junction: CLIP2.012516_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012516
Chromosome:chromosome 12
Location:3508121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496900 (1 of 1) IPR002711//IPR003615//IPR004919 - HNH endonuclease // HNH nuclease // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTAGAATCCGAGGTAAATCCCTCGACCGTATCATGACCGCATGGGGT
Internal bar code:TTGCGTGCTATACCAGAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3463
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCATACCCGGACAGCTC
Suggested primer 2:GCACTTACATCCGCATGCTG