Insertion junction: CLIP2.012524_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012524
Chromosome:chromosome 16
Location:7887898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689759 (1 of 2) PTHR10108//PTHR10108:SF788 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCCCAACCTAAACTGAACGCAATGCAAAAGAGGGCGTGTGCACACG
Internal bar code:TAGATGAAGTTTGCCTTTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1299
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCATGCCACAGAACAAA
Suggested primer 2:AGGGGAATGTTGTGAGCTCG