Insertion junction: CLIP2.012535_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012535
Chromosome:chromosome 3
Location:6386435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192550 RAD50 DNA repair protein; (1 of 1) K10866 - DNA repair protein RAD50 (RAD50) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCCGGCGCACGTGCAACGATTGCCGGTCGCGTGGGCATCAGCGGCCT
Internal bar code:CACCTCTAAGGTTCAGATTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:260
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTGCCTACCACCATTT
Suggested primer 2:TGATTACTGGCTCGAGGGGA