Insertion junction: CLIP2.012541_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012541
Chromosome:chromosome 3
Location:917413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146587 (1 of 3) PTHR24193//PTHR24193:SF87 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGAATGACCTTGGACTACTACAACTTCCATGTGCGCTTGTCCTGAGG
Internal bar code:GTTGGGTAGGCTTAATGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1650
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCGGAAACCCCATAA
Suggested primer 2:CGCCTACCGACACCTATGAC