Insertion junction: CLIP2.012544_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012544
Chromosome:chromosome 13
Location:3547371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCTGCTGCACCGCCGCCGGCCGCACCGCCCGCGGCCTCTTTGAGTC
Internal bar code:GTAGTCTTTTGGAATCATGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1976
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACTGCTAGCGTTGCTCT
Suggested primer 2:GCGTACTGGCTGATCTGGTT