Insertion junction: CLIP2.012556_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012556
Chromosome:chromosome 17
Location:2829319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718468 (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGGAGTAGTGCAAGGGCCAGGGGGCGGAGTGGTCTGTAATGACTGA
Internal bar code:ACAAAGGGCGGTTACTATCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGTGTGTGTGTGTGTGC
Suggested primer 2:GGAAGGGTGAAGTCCAGGTG