Insertion junction: CLIP2.012556_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012556
Chromosome:chromosome 17
Location:2829320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718468 (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGTAGATTCCAGCACCTTGCTTCCCAACGCCGCAGCCCCGCGCCCGC
Internal bar code:ACAAAGGGCGGTTACTATCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3720
LEAP-Seq percent confirming:75.7282
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGGGTGAAGTCCAGGTG
Suggested primer 2:GTACGTGTGTGTGTGTGTGC