Insertion junction: CLIP2.012563_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012563
Chromosome:chromosome 16
Location:2249333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658400 FDX2 Apoferredoxin; (1 of 6) K02639 - ferredoxin (petF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTGCTCCAAACCTCAATCGCTGCCACAGAACATGCTGGACGAGGAC
Internal bar code:ATGACTTACTTTTCGGAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:58.1395
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACAGCCCCCATTGACG
Suggested primer 2:AGCGGCCAATTGCAAATGTT