Insertion junction: CLIP2.012574_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012574
Chromosome:chromosome 7
Location:1439835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323550 PUS8 (1 of 2) 5.4.99.19 - 16S rRNA pseudouridine(516) synthase / 16S RNA Psi(516) synthase; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACCCTGGCTGACCCGCTGAGCCCCAAGGCGGCGGAGGCGGCGGCCAA
Internal bar code:GATGGCAAGAGGCGTTCGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTATCCCCAGTAGTGCC
Suggested primer 2:CGTACAGGTGGGTGTGGTAC