Insertion junction: CLIP2.012590_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012590
Chromosome:chromosome 6
Location:5338281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284900 CYN6,CYN20A,ROC7,CYN20-1 Cyclophilin 20-1; (1 of 4) K01802 - peptidylprolyl isomerase (E5.2.1.8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCATGGGAAGTGGGGGTGTCGCAGGGGCGTGGGGTTGGCCCTTGTGG
Internal bar code:TCGTTGTTGAGGTAGAACCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATTTGCCGGCTTCATGC
Suggested primer 2:GACACCTCATCGGTCTTGCA