Insertion junction: CLIP2.012591_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012591
Chromosome:chromosome 4
Location:1654661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTAACCCTCACGCCGCCGACTCGTCTTCGCTAACCTCACGACGTGGCC
Internal bar code:CGGCGAGTTCGGCGCCCTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1710
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACGCGGGGCTATCATAC
Suggested primer 2:ATGCGATGTACGGCATGGAT