Insertion junction: CLIP2.012591_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012591
Chromosome:chromosome 4
Location:1654663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGCGCATGGCCGGACGGGGGCGCGGATGGCGCACTGGCGTGAAGTA
Internal bar code:CGATATTGAATATTCTATTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3426
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGATGTACGGCATGGAT
Suggested primer 2:TCAACGCGGGGCTATCATAC