Insertion junction: CLIP2.012594_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012594
Chromosome:chromosome 8
Location:3880858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381900 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGCCTTCCACACACACGTTTTTTCAAGCACGTCAATTAAGCGTTTA
Internal bar code:ATGTATGGTAACCTACTTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1744
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATGATCGGGTACATGCG
Suggested primer 2:CTGGTGCCAGGACGTTTTTG