Insertion junction: CLIP2.012607_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012607
Chromosome:chromosome 1
Location:7612684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800140 (1 of 1) K12800 - NACHT, LRR and PYD domains-containing protein 3 (NLRP3, PYPAF1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCTCGCCATGCTCGCCAGCGCCGCTCCTCCCGGTGCTGCCGGTGCT
Internal bar code:GTTAGGACCAGTTCAGTATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1530
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGAGACGATGGGCTTT
Suggested primer 2:CTCCTCCTCTTCCTGCTCCT