Insertion junction: CLIP2.012608_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012608
Chromosome:chromosome 12
Location:519319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801346 (1 of 10) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTGGGTGCGTGTGGGTAGGAACGGGATGGTGAGCGGTCCAAGGGCGG
Internal bar code:AAGTTAGCGGCGGCAAGCCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACCTCTACTGCTCCGT
Suggested primer 2:GGTGGGAGTTCCTCATTGGG