Insertion junction: CLIP2.012608_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012608
Chromosome:chromosome 12
Location:519322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801346 (1 of 10) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGCTTTGTCGGGCTCGGCCATATAACCCCTCCTCCACCCACCCCAC
Internal bar code:TGACGAAACAGGCGTCGTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGAGTTCCTCATTGGG
Suggested primer 2:TGCTACCTCTACTGCTCCGT