Insertion junction: CLIP2.012613_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012613
Chromosome:chromosome 15
Location:2149730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142366 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGACAGGATGCTGTCAAAGCCGGAGCCGCGCGCGCGGAAGCTGAGGA
Internal bar code:CAGCATCTACTGGAGAACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:340
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGTGCCCCCTCCTTCAT
Suggested primer 2:AGAAAATGACGGGGCTTCGT