Insertion junction: CLIP2.012622_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012622
Chromosome:chromosome 13
Location:2611680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580900 (1 of 1) K07178 - RIO kinase 1 (RIOK1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCCTTTCGTCTTGGCTTTCTTCACATGCTTGGGCACCTTGGTTTTC
Internal bar code:CCCATCAAGCCTAAATTGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3006
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCAAGTCCAAGAAGGCGG
Suggested primer 2:CGCCGCTGTGATTTTGGAAA