Insertion junction: CLIP2.012626_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012626
Chromosome:chromosome 3
Location:1112853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148750 CLH1 Chlorophyllase I; (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCATGTACCGTACCGTGCAATGCTGCCCCCTTTACAGCATTGAACA
Internal bar code:TGGCGACCAACGGCGCGATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAACCCCTTTTTGGACT
Suggested primer 2:GCAGAGGAAAGCTCTGGAGG