Insertion junction: CLIP2.012633_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012633
Chromosome:chromosome 17
Location:6436760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744147 (1 of 1) K12854 - pre-mRNA-splicing helicase BRR2 (SNRNP200, BRR2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACGTCCCCACTGCCGCCTCCTGCCTGCTCTCCCTTCCCTGCGATACC
Internal bar code:TAACGAAGATCGATATTTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1447
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCAAAAGTCAAGGGG
Suggested primer 2:ACTGGGGCAGGATACCTCTT