Insertion junction: CLIP2.012660_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012660
Chromosome:chromosome 1
Location:6078479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043000 (1 of 1) PTHR30544//PTHR30544:SF6 - 23S RRNA METHYLTRANSFERASE // RADICAL SAM DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAGAAGCGGGTTATGACCAGGAAGGCTAGGCGTAGCAACTCTGGTAC
Internal bar code:GTGTACCATGCGAGTGTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2843
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGATGAGGGTATGGTGC
Suggested primer 2:GGAGGATGTGGAGGAGGACT