Insertion junction: CLIP2.012662_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012662
Chromosome:chromosome 13
Location:2180234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801527 (1 of 1) PF08819 - Domain of unknown function (DUF1802) (DUF1802) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCTCCGCCTTGAGGCCCGCCAGCGCCTGCCGCAGTCGCGCCTGCCGC
Internal bar code:AAAAGAGTTGGTAGTAAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:668
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGATATGAGTGGGGCG
Suggested primer 2:AGGCCAGGGTTGAATCCATG