Insertion junction: CLIP2.012668_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012668
Chromosome:chromosome 8
Location:3033617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375150 (1 of 1) PF11904//PF12796 - GPCR-chaperone (GPCR_chapero_1) // Ankyrin repeats (3 copies) (Ank_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGCGGGTAGCCAGCCACCTTACCTTGTCTTTCAACCCGGTCGCTAC
Internal bar code:CTCCTTTAGTCTACACGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:51.4286
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGGTTGCCGTGTCCTTG
Suggested primer 2:AGTCACATGAACGTGCCACT