Insertion junction: CLIP2.012669_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012669
Chromosome:chromosome 12
Location:2844518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503300 (1 of 1) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTTCTGAACAAGGCAGCTAAGCTCGAGGAGGTGGGCTGGGCAGCCTA
Internal bar code:GATGGTCTAAGTTTCGTTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGATCTCGCCACTTCTC
Suggested primer 2:GACTGCCTACCGTCTACAGC