Insertion junction: CLIP2.012672_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012672
Chromosome:chromosome 7
Location:4973187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347000 (1 of 6) IPR001245//IPR011009 - Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTGGCGTTGAGGGGTGTTGGGGTGTTGGGGGGTGTAACATGTGTTAC
Internal bar code:TTCACACTTCGGCTGTTTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1682
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGACACGGAAACACGG
Suggested primer 2:CAGCAACCGCAACAGAAACA