Insertion junction: CLIP2.012678_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012678
Chromosome:chromosome 6
Location:6346052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCACCAGCATAACTTGCACAGCTAGCCCAGACCAAGCACTGAGCCCA
Internal bar code:GTATTACTAGGCTTATATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2453
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCCTTTCTTACCCACT
Suggested primer 2:GCAGATGCAGTGTGTACCCT