Insertion junction: CLIP2.012680_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012680
Chromosome:chromosome 10
Location:4915293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453782 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCATAGGCTTACACCCAGCTCCGTGGTTTCTCCCCTTCAAAGTATGC
Internal bar code:TGTATGTGGGCTCCTCGTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2031
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTGTCTGGTGTGTTGT
Suggested primer 2:CGTGCCTCTACCACCAACAT