Insertion junction: CLIP2.012681_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012681
Chromosome:chromosome 2
Location:6887375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCTTGCCATGCGATTGTCCAGCGAAATGGCACGTGAGGCCTGCCTA
Internal bar code:CCATGGTAAATTTCTGCTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4133
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACGAAGACAGACACTCA
Suggested primer 2:GGCAAAACAAGTGAGCCAGG