Insertion junction: CLIP2.012687_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012687
Chromosome:chromosome 2
Location:176174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074350 intron
Cre02.g074370 CDPK8 Calcium/calmodulin-dependent protein kinase; (1 of 18) K13412 - calcium-dependent protein kinase (CPK) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGGGGGGGGGTTAGCTCGTGGAGGTAGCCGTTCAAGTGGAGAACGGA
Internal bar code:GAGGGTAGCTTTTCTGTTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATTTCAACAGTGCGGG
Suggested primer 2:AGTGCTCGAAGTACCACACG