Insertion junction: CLIP2.012689_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012689
Chromosome:chromosome 2
Location:4321045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105000 (1 of 3) PTHR11207//PTHR11207:SF7 - RIBONUCLEASE III // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCTGCCCACGACCACGACCCGCCACCTGCAACACCGCATAGCTAGT
Internal bar code:ACGTTGGGTGGCAGTGATACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5597
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGATCGCCATGACCAC
Suggested primer 2:CGCTTTGTGGCTTTCTGCTT