Insertion junction: CLIP2.012693_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012693
Chromosome:chromosome 16
Location:4425021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACCACTAGCCCGTTCTGCGTCTTGCTGTTCGCCAGCTGCTCCAACA
Internal bar code:CGGGTCCTGGGGGAAAGCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTCTATCGATGCGCTGA
Suggested primer 2:GTGGGCTGAATTGTTGGCTG