Insertion junction: CLIP2.012702_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012702
Chromosome:chromosome 3
Location:3205067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165200 APG7 Autophagy-related protein, ubiquitin-activating enzyme E1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGGGAGACAAAGGTGGAGGAGGAGAAGGAGGAGGAGGCTGGAAGCA
Internal bar code:ACTGTGGATGTTCCGCCGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGCTTTCGTTTTCCTTT
Suggested primer 2:AGCAGCAACAACAACAGCAG