Insertion junction: CLIP2.012707_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012707
Chromosome:chromosome 4
Location:2359056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221050 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAACTCTTTGCGGAGCCGCGCGAATCCGCAGTGGAGGTTCCTTACTA
Internal bar code:CACCAGAAAATGTCGAGTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCTCATCCCGCACATT
Suggested primer 2:CTCCACTCCCACCACCATTC