Insertion junction: CLIP2.012711_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012711
Chromosome:chromosome 1
Location:4344981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029500 CDPKK3 Calcium/calmodulin-dependent protein kinase kinase; (1 of 1) PTHR24347//PTHR24347:SF249 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTGCGGGTGCCAGTGGCGCAGGAGGCGGCACAAGCGGCGGCGCGTC
Internal bar code:GTTATTTTGTGGGAAAACGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGGGTGCTGATTGGAAG
Suggested primer 2:ACAGACACAGGCTCTGATGC