Insertion junction: CLIP2.012720_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012720
Chromosome:chromosome 17
Location:160401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696950 (1 of 2) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR016187//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // C-type lectin fold // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGCCGGTGTGGCACAATTACCAGGCTCACCGACCCATCCCCGCTTA
Internal bar code:TCTCAGAAGAGTTTTCAAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2356
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGACTGTAACCCCTTC
Suggested primer 2:CCTGTGTCCTGTGCTCTCAG