Insertion junction: CLIP2.012722_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012722
Chromosome:chromosome 14
Location:1079264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614450 Hypothetical protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCGCCCGGGTGTCCGGCCCCAAGTGTGCCGCCCGCTGCATCAGCG
Internal bar code:TTTAAGGTAAGTGCAATGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2603
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAAAGCTCACCTCGCTCA
Suggested primer 2:GGTCGCAAAGGATCCTCACA