Insertion junction: CLIP2.012723_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012723
Chromosome:chromosome 9
Location:5806996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTCCCAGCCTCACAGACGCCACCGCTGCTCCCGGGTCCGGCTTGAGG
Internal bar code:AGTTGGGTTAAATAATTGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3726
LEAP-Seq percent confirming:79.2453
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCCCATAGCTGCTACAA
Suggested primer 2:GCTGCTGCTGGTGAAATACG