Insertion junction: CLIP2.012728_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012728
Chromosome:chromosome 1
Location:545995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGTCCTGCCCGCTGCCCGCTGCCCGCACTACGCAGGCACTGCCTGG
Internal bar code:AGCACGGCGTTCGTAAGCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:143
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACGACTTTGACCACAGA
Suggested primer 2:AGCCAGGAATACACGCGAAA