Insertion junction: CLIP2.012729_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.012729
Chromosome:chromosome 6
Location:6646119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294850 UBC10 Ubiquitin-conjugating enzyme E2; (1 of 1) PTHR24067:SF142 - UBIQUITIN-CONJUGATING ENZYME E2 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACTTGACAGTGGGCGCCTTATTAGGGTACTCCTCCGAGAACTCCAT
Internal bar code:TTAGAACTCTCGTCTTTGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3773
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAATCCGCCAGCGATTG
Suggested primer 2:CCACGCTTTCAACACATGCA