Insertion junction: CLIP2.012730_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012730
Chromosome:chromosome 7
Location:4505582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343650 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAATTTTGCGACGCCTCTACAGATGCCCGGGGCCGTGGGCACAGCGC
Internal bar code:GTCGGATGGCCAGGTCCGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCTTACGTCGCTTTTG
Suggested primer 2:CCTGCACTCCTGAAAGAGCA