Insertion junction: CLIP2.012741_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012741
Chromosome:chromosome 11
Location:610126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAATCATAGATCTATGCCATTGAACCCATTCGAGTATTATGTCCAGTC
Internal bar code:TTGAAAGGATGAACCAATTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAACATGTGCTGTGGG
Suggested primer 2:AAGACAGGCACACATACGCA