Insertion junction: CLIP2.012744_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012744
Chromosome:chromosome 11
Location:2177949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467735 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCCCAGCCCATGCATGCACAGTCATGCACCAGCAGGCCTATGGGG
Internal bar code:GCCCTTTATGGATCACTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1616
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGGAAAGAGCTCCTT
Suggested primer 2:CGGAGGCATTTTTGGGCAAA