Insertion junction: CLIP2.012761_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012761
Chromosome:chromosome 9
Location:1909227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397350 RAD3A,XPD3 (1 of 1) K15362 - fanconi anemia group J protein (BRIP1, BACH1, FANCJ); RAD3/XP-D family DNA-binding helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCTGGTATTGACACAACCACACACACACGTCGGGCTTTCGTTTCGT
Internal bar code:ACCTGGAGTGCTGGGTATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1935
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGCTTGGTAAAGGGGTT
Suggested primer 2:GATTCCATGCATCACACGGC