Insertion junction: CLIP2.012772_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012772
Chromosome:chromosome 3
Location:1992299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155700 (1 of 2) PTHR22840//PTHR22840:SF12 - FAMILY NOT NAMED // WD REPEAT-CONTAINING PROTEIN 36 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCTCCAGTCTGGGGGGCGGCGGCCCCATTGAGAGCAAGCAACAGGC
Internal bar code:TAGCTTGTAGTGTCTGGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GACACACAAAGACCGGTTGC
Suggested primer 2:GTACGCACCGTCAAACCAAC