Insertion junction: CLIP2.012776_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012776
Chromosome:chromosome 17
Location:4384970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730550 (1 of 3) PTHR22298:SF39 - ENDOGLUCANASE 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACGATGCGATGCCGACCCTGCGCCGTACCGATCCTGTCCATGCCCTG
Internal bar code:AGCGGAGCTTTTATTGCTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTAGTGGAAGCCATAGCG
Suggested primer 2:CTGACGTGGCTGTTGTGTTG