Insertion junction: CLIP2.012778_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012778
Chromosome:chromosome 2
Location:2802458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCCGTAGCCTGCAGATTCGTTGCCTTCGCTGCTCCTCTTCGATAACG
Internal bar code:GCTGAATTTTATTCGGTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1514
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCAAGTGCATCAGTGAT
Suggested primer 2:AGTGCTTTGCGTTGGAACAC