Insertion junction: CLIP2.012781_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.012781
Chromosome:chromosome 17
Location:2577587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716150 SUMO90,SUM4 Similar to Small ubiquitin-like modifier; (1 of 4) PF03171//PF11976 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTGTGGTGTCATTCTGTTTTACAGCATAATTGCCTTCATAATCGGAT
Internal bar code:AGTAATTGTCCGTTAGGGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAGGACCCGTTATCCG
Suggested primer 2:GTCAGGGACAACGAGGGAAG